Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Mir874-201ENSMUST00000104769 76 ntBASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Gm13394-201ENSMUST00000121658 1000 ntBASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC18.95■□□□□ 0.62
Arhgef40Q3UPH7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 AC159205.5-202ENSMUST00000224849 386 ntBASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Arhgef40Q3UPH7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Gm5863-201ENSMUST00000121760 1008 ntBASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Arhgef40Q3UPH7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Gm12286-201ENSMUST00000119246 1002 ntBASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arhgef40Q3UPH7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Gm6335-201ENSMUST00000118081 1194 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Gm7816-201ENSMUST00000119884 1194 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Gm15542-201ENSMUST00000121585 1194 ntBASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.91■□□□□ 0.62
Arhgef40Q3UPH7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms