Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nhlrc4Q3UP44 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm16177-201ENSMUST00000120728 718 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm4271-201ENSMUST00000174444 973 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Gm29649-201ENSMUST00000185649 419 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nhlrc4Q3UP44 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Gm7029-201ENSMUST00000173226 450 ntBASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Gm6266-201ENSMUST00000203844 806 ntBASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nhlrc4Q3UP44 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms