Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nlrc4Q3UP24 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gm7029-201ENSMUST00000173226 450 ntBASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gm6458-201ENSMUST00000211573 635 ntBASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nlrc4Q3UP24 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Gm13226-201ENSMUST00000117838 404 ntBASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Gm16479-201ENSMUST00000121706 932 ntBASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms