Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.16□□□□□ -0.14
Snx27Q3UHD6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Gm9368-201ENSMUST00000219348 831 ntBASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Gm8227-201ENSMUST00000223306 571 ntBASIC14.16□□□□□ -0.14
Snx27Q3UHD6 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Snx27Q3UHD6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm13342-201ENSMUST00000121055 207 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm8738-201ENSMUST00000172606 329 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm6334-201ENSMUST00000207083 228 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm10608-202ENSMUST00000213924 676 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm7046-201ENSMUST00000221351 977 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Snx27Q3UHD6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Snx27Q3UHD6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm12241-201ENSMUST00000118330 726 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Mospd4-201ENSMUST00000180618 576 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gm8099-201ENSMUST00000200510 742 ntBASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Snx27Q3UHD6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms