Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43aQ3TL54 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim43aQ3TL54 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Gm27437-201ENSMUST00000183429 107 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim43aQ3TL54 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gm27838-201ENSMUST00000184829 128 ntBASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim43aQ3TL54 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim43aQ3TL54 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms