Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm13689-201ENSMUST00000119360 685 ntBASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cul4aQ3TCH7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cul4aQ3TCH7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cul4aQ3TCH7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cul4aQ3TCH7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cul4aQ3TCH7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cul4aQ3TCH7 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cul4aQ3TCH7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms