Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Tff1Q08423 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.93□□□□□ -0.66
Tff1Q08423 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tff1Q08423 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tff1Q08423 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tff1Q08423 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm4804-201ENSMUST00000182234 999 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Gm28760-201ENSMUST00000185995 736 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tff1Q08423 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.92□□□□□ -0.66
Tff1Q08423 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tff1Q08423 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Tff1Q08423 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.91□□□□□ -0.66
Tff1Q08423 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Gm4984-201ENSMUST00000115987 360 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Tff1Q08423 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.91□□□□□ -0.66
Tff1Q08423 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.91□□□□□ -0.66
Tff1Q08423 Mir6420-201ENSMUST00000185032 102 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.91□□□□□ -0.66
Tff1Q08423 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Gm18624-201ENSMUST00000220966 658 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Gm9797-201ENSMUST00000052902 613 ntBASIC10.91□□□□□ -0.66
Tff1Q08423 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms