Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Col6a2Q02788 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Col6a2Q02788 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col6a2Q02788 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.1□□□□□ -0.31
Col6a2Q02788 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a2Q02788 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a2Q02788 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col6a2Q02788 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.09□□□□□ -0.31
Col6a2Q02788 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Gm26927-201ENSMUST00000182385 965 ntBASIC13.09□□□□□ -0.31
Col6a2Q02788 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.09□□□□□ -0.31
Col6a2Q02788 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Col6a2Q02788 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a2Q02788 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a2Q02788 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a2Q02788 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a2Q02788 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.08□□□□□ -0.32
Col6a2Q02788 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Matn2-206ENSMUST00000228570 2798 ntBASIC13.08□□□□□ -0.32
Col6a2Q02788 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.08□□□□□ -0.32
Col6a2Q02788 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a2Q02788 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Gm19184-201ENSMUST00000196798 928 ntBASIC13.08□□□□□ -0.32
Col6a2Q02788 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.08□□□□□ -0.32
Col6a2Q02788 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a2Q02788 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a2Q02788 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms