Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd3P97770 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.37□□□□□ -0.27
Thumpd3P97770 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thumpd3P97770 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm45384-201ENSMUST00000210451 277 ntBASIC13.37□□□□□ -0.27
Thumpd3P97770 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Thumpd3P97770 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.37□□□□□ -0.27
Thumpd3P97770 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd3P97770 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.37□□□□□ -0.27
Thumpd3P97770 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.37□□□□□ -0.27
Thumpd3P97770 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd3P97770 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm15770-201ENSMUST00000117498 584 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm11478-201ENSMUST00000117851 599 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.36□□□□□ -0.27
Thumpd3P97770 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Thumpd3P97770 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.36□□□□□ -0.27
Thumpd3P97770 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd3P97770 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.35□□□□□ -0.27
Thumpd3P97770 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Thumpd3P97770 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd3P97770 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms