Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Npas1P97459 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.01□□□□□ -0.65
Npas1P97459 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.01□□□□□ -0.65
Npas1P97459 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Npas1P97459 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.01□□□□□ -0.65
Npas1P97459 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Npas1P97459 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.01□□□□□ -0.65
Npas1P97459 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.01□□□□□ -0.65
Npas1P97459 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.01□□□□□ -0.65
Npas1P97459 Gm6443-201ENSMUST00000203599 874 ntBASIC11.01□□□□□ -0.65
Npas1P97459 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Npas1P97459 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.01□□□□□ -0.65
Npas1P97459 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Npas1P97459 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.01□□□□□ -0.65
Npas1P97459 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npas1P97459 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.01□□□□□ -0.65
Npas1P97459 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npas1P97459 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Npas1P97459 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npas1P97459 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Gm14452-201ENSMUST00000118680 1632 ntBASIC11□□□□□ -0.65
Npas1P97459 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11□□□□□ -0.65
Npas1P97459 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11□□□□□ -0.65
Npas1P97459 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11□□□□□ -0.65
Npas1P97459 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11□□□□□ -0.65
Npas1P97459 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11□□□□□ -0.65
Npas1P97459 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11□□□□□ -0.65
Npas1P97459 AC133598.3-202ENSMUST00000224219 531 ntBASIC11□□□□□ -0.65
Npas1P97459 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11□□□□□ -0.65
Npas1P97459 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11□□□□□ -0.65
Npas1P97459 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Gm28323-201ENSMUST00000186817 2499 ntBASIC11□□□□□ -0.65
Npas1P97459 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npas1P97459 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Npas1P97459 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Npas1P97459 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Npas1P97459 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Npas1P97459 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.99□□□□□ -0.65
Npas1P97459 Gm14494-201ENSMUST00000118786 435 ntBASIC10.99□□□□□ -0.65
Npas1P97459 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.99□□□□□ -0.65
Npas1P97459 Gm18766-201ENSMUST00000189811 808 ntBASIC10.99□□□□□ -0.65
Npas1P97459 Gm29541-201ENSMUST00000191351 678 ntBASIC10.99□□□□□ -0.65
Npas1P97459 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Npas1P97459 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.99□□□□□ -0.65
Npas1P97459 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.99□□□□□ -0.65
Npas1P97459 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms