Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm23200-201ENSMUST00000104379 132 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm15276-201ENSMUST00000145953 498 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm7600-201ENSMUST00000209657 785 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.12□□□□□ -0.47
Cacna1aP97445 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.12□□□□□ -0.47
Cacna1aP97445 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cacna1aP97445 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.11□□□□□ -0.47
Cacna1aP97445 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.11□□□□□ -0.47
Cacna1aP97445 AA914427-201ENSMUST00000193194 1166 ntBASIC12.11□□□□□ -0.47
Cacna1aP97445 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.11□□□□□ -0.47
Cacna1aP97445 Gm11667-201ENSMUST00000119828 486 ntBASIC12.11□□□□□ -0.47
Cacna1aP97445 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cacna1aP97445 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm11340-201ENSMUST00000119226 412 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm26185-201ENSMUST00000157692 266 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm8738-201ENSMUST00000172606 329 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 Gm32025-201ENSMUST00000217960 307 ntBASIC12.1□□□□□ -0.47
Cacna1aP97445 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cacna1aP97445 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cacna1aP97445 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms