Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43cP86449 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim43cP86449 Gm11618-201ENSMUST00000117946 267 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim43cP86449 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim43cP86449 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.26□□□□□ -0.13
Trim43cP86449 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim43cP86449 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim43cP86449 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim43cP86449 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43cP86449 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim43cP86449 Gm8805-201ENSMUST00000117848 313 ntBASIC14.25□□□□□ -0.13
Trim43cP86449 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim43cP86449 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.25□□□□□ -0.13
Trim43cP86449 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim43cP86449 Gm5356-201ENSMUST00000093326 615 ntBASIC14.25□□□□□ -0.13
Trim43cP86449 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trim43cP86449 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.25□□□□□ -0.13
Trim43cP86449 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim43cP86449 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trim43cP86449 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim43cP86449 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim43cP86449 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trim43cP86449 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Gm12203-201ENSMUST00000118235 598 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim43cP86449 Gm12209-201ENSMUST00000120089 596 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43cP86449 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim43cP86449 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Gm17794-201ENSMUST00000220252 955 ntBASIC14.24□□□□□ -0.13
Trim43cP86449 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim43cP86449 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim43cP86449 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim43cP86449 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms