Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43bP86448 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43bP86448 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim43bP86448 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43bP86448 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim43bP86448 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.52□□□□□ -0.25
Trim43bP86448 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trim43bP86448 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.52□□□□□ -0.25
Trim43bP86448 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43bP86448 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim43bP86448 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43bP86448 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Trim43bP86448 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim43bP86448 Gm12490-201ENSMUST00000120255 560 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Gm24420-201ENSMUST00000176676 59 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Gm5279-201ENSMUST00000199575 745 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim43bP86448 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Gm18624-201ENSMUST00000220966 658 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim43bP86448 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43bP86448 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim43bP86448 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43bP86448 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Trim43bP86448 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.51□□□□□ -0.25
Trim43bP86448 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim43bP86448 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm14928-201ENSMUST00000120198 477 ntBASIC13.5□□□□□ -0.25
Trim43bP86448 Mir6392-201ENSMUST00000184924 108 ntBASIC13.5□□□□□ -0.25
Trim43bP86448 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm17795-201ENSMUST00000214505 757 ntBASIC13.5□□□□□ -0.25
Trim43bP86448 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim43bP86448 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim43bP86448 Pck2-205ENSMUST00000226352 2784 ntBASIC13.5□□□□□ -0.25
Trim43bP86448 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43bP86448 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms