Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcaP82350 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcaP82350 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11□□□□□ -0.65
SgcaP82350 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11□□□□□ -0.65
SgcaP82350 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Gm4971-201ENSMUST00000205991 1108 ntBASIC11□□□□□ -0.65
SgcaP82350 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 AC133598.3-202ENSMUST00000224219 531 ntBASIC11□□□□□ -0.65
SgcaP82350 AC124549.3-201ENSMUST00000225541 367 ntBASIC11□□□□□ -0.65
SgcaP82350 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcaP82350 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcaP82350 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11□□□□□ -0.65
SgcaP82350 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcaP82350 Gm37014-201ENSMUST00000194723 2253 ntBASIC11□□□□□ -0.65
SgcaP82350 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11□□□□□ -0.65
SgcaP82350 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SgcaP82350 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.99□□□□□ -0.65
SgcaP82350 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.99□□□□□ -0.65
SgcaP82350 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Gm9727-201ENSMUST00000161387 555 ntBASIC10.99□□□□□ -0.65
SgcaP82350 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SgcaP82350 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SgcaP82350 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.99□□□□□ -0.65
SgcaP82350 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SgcaP82350 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
SgcaP82350 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcaP82350 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms