Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm11451-201ENSMUST00000118946 630 ntBASIC21.03■□□□□ 0.96
Cux2P70298 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC21.03■□□□□ 0.96
Cux2P70298 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC21.03■□□□□ 0.96
Cux2P70298 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cux2P70298 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cux2P70298 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC21.02■□□□□ 0.96
Cux2P70298 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cux2P70298 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Sybu-209ENSMUST00000228639 4113 ntBASIC21.02■□□□□ 0.96
Cux2P70298 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Gm13809-201ENSMUST00000117921 597 ntBASIC21.02■□□□□ 0.96
Cux2P70298 Gm5863-201ENSMUST00000121760 1008 ntBASIC21.02■□□□□ 0.96
Cux2P70298 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cux2P70298 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC21.02■□□□□ 0.96
Cux2P70298 Gm3332-201ENSMUST00000189337 928 ntBASIC21.02■□□□□ 0.96
Cux2P70298 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC21.02■□□□□ 0.96
Cux2P70298 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC21.02■□□□□ 0.96
Cux2P70298 AC156501.1-201ENSMUST00000228219 270 ntBASIC21.02■□□□□ 0.96
Cux2P70298 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cux2P70298 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Cux2P70298 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC21.01■□□□□ 0.95
Cux2P70298 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 AC158355.1-201ENSMUST00000215895 1705 ntBASIC21.01■□□□□ 0.95
Cux2P70298 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Cux2P70298 Gm20392-201ENSMUST00000173047 701 ntBASIC21.01■□□□□ 0.95
Cux2P70298 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Gm10731-201ENSMUST00000181171 448 ntBASIC21.01■□□□□ 0.95
Cux2P70298 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC21.01■□□□□ 0.95
Cux2P70298 Gm17889-201ENSMUST00000198410 598 ntBASIC21.01■□□□□ 0.95
Cux2P70298 Gm3793-201ENSMUST00000204973 672 ntBASIC21.01■□□□□ 0.95
Cux2P70298 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Cux2P70298 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Cux2P70298 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cux2P70298 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cux2P70298 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC21.01■□□□□ 0.95
Cux2P70298 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cux2P70298 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cux2P70298 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Cux2P70298 Gm9129-201ENSMUST00000218173 1689 ntBASIC21■□□□□ 0.95
Cux2P70298 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cux2P70298 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Gm22144-201ENSMUST00000157402 102 ntBASIC21■□□□□ 0.95
Cux2P70298 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC21■□□□□ 0.95
Cux2P70298 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC21■□□□□ 0.95
Cux2P70298 Gm807-202ENSMUST00000224929 408 ntBASIC21■□□□□ 0.95
Cux2P70298 Gm9785-201ENSMUST00000062642 1006 ntBASIC21■□□□□ 0.95
Cux2P70298 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Gm7049-201ENSMUST00000223520 1712 ntBASIC21■□□□□ 0.95
Cux2P70298 Gm7114-201ENSMUST00000190159 1789 ntBASIC21■□□□□ 0.95
Cux2P70298 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cux2P70298 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cux2P70298 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cux2P70298 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Mir1956-201ENSMUST00000157748 65 ntBASIC20.99■□□□□ 0.95
Cux2P70298 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Cux2P70298 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cux2P70298 Gm23771-201ENSMUST00000178702 110 ntBASIC20.99■□□□□ 0.95
Cux2P70298 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC20.99■□□□□ 0.95
Cux2P70298 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cux2P70298 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cux2P70298 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cux2P70298 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms