Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Six5P70178 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.29□□□□□ -0.44
Six5P70178 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
Six5P70178 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.29□□□□□ -0.44
Six5P70178 Gm12138-201ENSMUST00000122180 951 ntBASIC12.29□□□□□ -0.44
Six5P70178 Gm10156-201ENSMUST00000122364 462 ntBASIC12.29□□□□□ -0.44
Six5P70178 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 Gm6244-201ENSMUST00000178732 841 ntBASIC12.29□□□□□ -0.44
Six5P70178 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.29□□□□□ -0.44
Six5P70178 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.29□□□□□ -0.44
Six5P70178 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Six5P70178 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Six5P70178 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.29□□□□□ -0.44
Six5P70178 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.28□□□□□ -0.44
Six5P70178 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.28□□□□□ -0.44
Six5P70178 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.28□□□□□ -0.44
Six5P70178 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Six5P70178 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gm11814-201ENSMUST00000119515 929 ntBASIC12.28□□□□□ -0.44
Six5P70178 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.28□□□□□ -0.44
Six5P70178 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.28□□□□□ -0.44
Six5P70178 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.28□□□□□ -0.44
Six5P70178 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Six5P70178 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Six5P70178 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Six5P70178 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Six5P70178 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Six5P70178 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Six5P70178 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Six5P70178 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.27□□□□□ -0.44
Six5P70178 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Six5P70178 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Six5P70178 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Six5P70178 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.27□□□□□ -0.45
Six5P70178 Gm24196-201ENSMUST00000179161 110 ntBASIC12.27□□□□□ -0.45
Six5P70178 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms