Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm42612-201ENSMUST00000197986 623 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm43170-201ENSMUST00000199827 612 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgb1P63158 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb1P63158 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.47□□□□□ -0.09
Hmgb1P63158 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.46□□□□□ -0.09
Hmgb1P63158 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.46□□□□□ -0.09
Hmgb1P63158 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.46□□□□□ -0.09
Hmgb1P63158 Gm20949-201ENSMUST00000206478 952 ntBASIC14.46□□□□□ -0.09
Hmgb1P63158 Gm7730-201ENSMUST00000212486 454 ntBASIC14.46□□□□□ -0.09
Hmgb1P63158 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.46□□□□□ -0.09
Hmgb1P63158 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Hmgb1P63158 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb1P63158 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb1P63158 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.46□□□□□ -0.1
Hmgb1P63158 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb1P63158 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.45□□□□□ -0.1
Hmgb1P63158 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hmgb1P63158 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb1P63158 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms