Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lhx1P63006 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Lhx1P63006 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.88□□□□□ -0.35
Lhx1P63006 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lhx1P63006 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx1P63006 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.87□□□□□ -0.35
Lhx1P63006 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.87□□□□□ -0.35
Lhx1P63006 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.87□□□□□ -0.35
Lhx1P63006 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm23931-201ENSMUST00000103842 109 ntBASIC12.87□□□□□ -0.35
Lhx1P63006 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.87□□□□□ -0.35
Lhx1P63006 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm25927-201ENSMUST00000175058 117 ntBASIC12.87□□□□□ -0.35
Lhx1P63006 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Lhx1P63006 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
Lhx1P63006 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx1P63006 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx1P63006 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.86□□□□□ -0.35
Lhx1P63006 Gm17208-201ENSMUST00000168388 535 ntBASIC12.86□□□□□ -0.35
Lhx1P63006 Gm37008-201ENSMUST00000195712 319 ntBASIC12.86□□□□□ -0.35
Lhx1P63006 Gm19184-201ENSMUST00000196798 928 ntBASIC12.86□□□□□ -0.35
Lhx1P63006 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx1P63006 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lhx1P63006 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx1P63006 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx1P63006 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Lhx1P63006 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lhx1P63006 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx1P63006 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms