Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.34□□□□□ -0.91
Rpl39P62892 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.34□□□□□ -0.91
Rpl39P62892 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Rpl39P62892 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rpl39P62892 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.92
Rpl39P62892 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm13365-201ENSMUST00000121188 973 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Rpl39P62892 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Rpl39P62892 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Rpl39P62892 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.33□□□□□ -0.92
Rpl39P62892 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Rpl39P62892 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rpl39P62892 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.32□□□□□ -0.92
Rpl39P62892 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Gm25287-201ENSMUST00000103846 110 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Gm22918-201ENSMUST00000103855 110 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Rpl39P62892 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.32□□□□□ -0.92
Rpl39P62892 Gm24420-201ENSMUST00000176676 59 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Gm4804-201ENSMUST00000182234 999 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Gm27494-201ENSMUST00000184735 189 ntBASIC9.32□□□□□ -0.92
Rpl39P62892 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.32□□□□□ -0.92
Rpl39P62892 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rpl39P62892 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Rpl39P62892 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Rpl39P62892 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Rpl39P62892 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.32□□□□□ -0.92
Rpl39P62892 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms