Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ube2d3P61079 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Ube2d3P61079 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube2d3P61079 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.42□□□□□ -0.9
Ube2d3P61079 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.42□□□□□ -0.9
Ube2d3P61079 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.42□□□□□ -0.9
Ube2d3P61079 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ube2d3P61079 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.42□□□□□ -0.9
Ube2d3P61079 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.42□□□□□ -0.9
Ube2d3P61079 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Ube2d3P61079 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ube2d3P61079 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube2d3P61079 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.41□□□□□ -0.9
Ube2d3P61079 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube2d3P61079 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.41□□□□□ -0.9
Ube2d3P61079 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube2d3P61079 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms