Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pdx1P52946 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm11618-201ENSMUST00000117946 267 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Gm8213-201ENSMUST00000118191 441 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm27486-201ENSMUST00000184923 80 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Gm19931-201ENSMUST00000198920 368 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm18041-201ENSMUST00000218210 618 ntBASIC12.98□□□□□ -0.33
Pdx1P52946 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pdx1P52946 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pdx1P52946 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdx1P52946 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdx1P52946 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdx1P52946 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdx1P52946 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Pdx1P52946 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdx1P52946 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Gm12203-201ENSMUST00000118235 598 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdx1P52946 Gm12209-201ENSMUST00000120089 596 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdx1P52946 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pdx1P52946 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdx1P52946 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdx1P52946 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdx1P52946 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.97□□□□□ -0.33
Pdx1P52946 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pdx1P52946 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pdx1P52946 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.97□□□□□ -0.33
Pdx1P52946 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdx1P52946 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdx1P52946 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms