Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm23119-201ENSMUST00000158610 140 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Brca1P48754 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Gm29615-201ENSMUST00000185371 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28224-201ENSMUST00000186078 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm29001-201ENSMUST00000186177 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28292-201ENSMUST00000186593 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28101-201ENSMUST00000187608 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm29076-201ENSMUST00000187689 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28302-201ENSMUST00000187931 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28646-201ENSMUST00000188220 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28205-201ENSMUST00000189177 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm29032-201ENSMUST00000189797 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm28695-201ENSMUST00000190300 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm37448-201ENSMUST00000192795 697 ntBASIC14.45□□□□□ -0.1
Brca1P48754 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Gm45550-201ENSMUST00000209380 946 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Brca1P48754 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Brca1P48754 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.44□□□□□ -0.1
Brca1P48754 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Brca1P48754 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Brca1P48754 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Brca1P48754 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.44□□□□□ -0.1
Brca1P48754 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.44□□□□□ -0.1
Brca1P48754 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.44□□□□□ -0.1
Brca1P48754 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Brca1P48754 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm13035-201ENSMUST00000117496 342 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Gm14460-201ENSMUST00000121511 639 ntBASIC14.43□□□□□ -0.1
Brca1P48754 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm27627-201ENSMUST00000183644 150 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.43□□□□□ -0.1
Brca1P48754 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.43□□□□□ -0.1
Brca1P48754 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Brca1P48754 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.43□□□□□ -0.1
Brca1P48754 Gm43962-201ENSMUST00000203898 190 ntBASIC14.43□□□□□ -0.1
Brca1P48754 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms