Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox2P48432 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox2P48432 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox2P48432 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox2P48432 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 Gm14822-201ENSMUST00000122247 291 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 Gm25144-201ENSMUST00000179561 110 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Gm25352-201ENSMUST00000179815 110 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Gm3436-201ENSMUST00000179930 840 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox2P48432 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sox2P48432 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.29□□□□□ -0.44
Sox2P48432 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox2P48432 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox2P48432 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox2P48432 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox2P48432 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox2P48432 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Gm27772-201ENSMUST00000184900 187 ntBASIC12.28□□□□□ -0.44
Sox2P48432 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.28□□□□□ -0.44
Sox2P48432 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox2P48432 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sox2P48432 Gm44771-201ENSMUST00000206975 626 ntBASIC12.28□□□□□ -0.44
Sox2P48432 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.28□□□□□ -0.44
Sox2P48432 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.28□□□□□ -0.44
Sox2P48432 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.28□□□□□ -0.44
Sox2P48432 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms