Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gli1P47806 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.84□□□□□ -0.35
Gli1P47806 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gli1P47806 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gli1P47806 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.84□□□□□ -0.35
Gli1P47806 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gli1P47806 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gli1P47806 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gli1P47806 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gli1P47806 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Gli1P47806 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gli1P47806 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gli1P47806 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Gm15460-201ENSMUST00000118147 391 ntBASIC12.83□□□□□ -0.36
Gli1P47806 Gm15393-201ENSMUST00000120499 219 ntBASIC12.83□□□□□ -0.36
Gli1P47806 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.83□□□□□ -0.36
Gli1P47806 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.83□□□□□ -0.36
Gli1P47806 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.83□□□□□ -0.36
Gli1P47806 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gli1P47806 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Mir6420-201ENSMUST00000185032 102 ntBASIC12.83□□□□□ -0.36
Gli1P47806 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Gm21470-201ENSMUST00000187680 696 ntBASIC12.83□□□□□ -0.36
Gli1P47806 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.83□□□□□ -0.36
Gli1P47806 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gli1P47806 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.83□□□□□ -0.36
Gli1P47806 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gli1P47806 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.83□□□□□ -0.36
Gli1P47806 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gli1P47806 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Gli1P47806 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.82□□□□□ -0.36
Gli1P47806 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gli1P47806 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.82□□□□□ -0.36
Gli1P47806 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gli1P47806 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.82□□□□□ -0.36
Gli1P47806 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.82□□□□□ -0.36
Gli1P47806 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.82□□□□□ -0.36
Gli1P47806 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gli1P47806 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.82□□□□□ -0.36
Gli1P47806 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.81□□□□□ -0.36
Gli1P47806 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gli1P47806 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.81□□□□□ -0.36
Gli1P47806 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gli1P47806 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gli1P47806 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gli1P47806 Gm12585-201ENSMUST00000117307 290 ntBASIC12.81□□□□□ -0.36
Gli1P47806 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gli1P47806 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gli1P47806 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.81□□□□□ -0.36
Gli1P47806 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.81□□□□□ -0.36
Gli1P47806 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gli1P47806 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gli1P47806 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms