Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx2P43241 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Gm12217-201ENSMUST00000118858 696 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Gm8099-201ENSMUST00000200510 742 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdx2P43241 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdx2P43241 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Cdx2P43241 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Gm22058-201ENSMUST00000083393 310 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Cdx2P43241 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.42□□□□□ -0.42
Cdx2P43241 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx2P43241 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx2P43241 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Daam2-202ENSMUST00000224595 1926 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Gm13665-201ENSMUST00000120830 528 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Mir6927-201ENSMUST00000184494 71 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdx2P43241 Gm37986-201ENSMUST00000193285 383 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdx2P43241 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.41□□□□□ -0.42
Cdx2P43241 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdx2P43241 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cdx2P43241 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx2P43241 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdx2P43241 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms