Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm9823-201ENSMUST00000051212 327 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.82□□□□□ -0.68
Cdkn1aP39689 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn1aP39689 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm22018-201ENSMUST00000104357 131 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Mir874-201ENSMUST00000104769 76 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm11637-201ENSMUST00000120601 592 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm11978-201ENSMUST00000122315 466 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm38002-201ENSMUST00000193255 180 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm18054-201ENSMUST00000207539 555 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gm19163-201ENSMUST00000223313 780 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.81□□□□□ -0.68
Cdkn1aP39689 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn1aP39689 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.8□□□□□ -0.68
Cdkn1aP39689 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdkn1aP39689 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn1aP39689 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms