Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Foxa1P35582 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxa1P35582 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Foxa1P35582 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.13□□□□□ -0.47
Foxa1P35582 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm11978-201ENSMUST00000122315 466 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.13□□□□□ -0.47
Foxa1P35582 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm24196-201ENSMUST00000179161 110 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm6458-201ENSMUST00000211573 635 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Foxa1P35582 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.13□□□□□ -0.47
Foxa1P35582 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.13□□□□□ -0.47
Foxa1P35582 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Foxa1P35582 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Foxa1P35582 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxa1P35582 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Foxa1P35582 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.12□□□□□ -0.47
Foxa1P35582 Gm12203-201ENSMUST00000118235 598 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Gm12209-201ENSMUST00000120089 596 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.12□□□□□ -0.47
Foxa1P35582 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxa1P35582 Gm27847-201ENSMUST00000183711 107 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Gm27375-201ENSMUST00000183799 107 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Gm8602-201ENSMUST00000184045 607 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxa1P35582 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.12□□□□□ -0.47
Foxa1P35582 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms