Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.19□□□□□ -0.46
Hoxc5P32043 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxc5P32043 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc5P32043 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.19□□□□□ -0.46
Hoxc5P32043 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Gm14057-201ENSMUST00000120631 482 ntBASIC12.18□□□□□ -0.46
Hoxc5P32043 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.18□□□□□ -0.46
Hoxc5P32043 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.18□□□□□ -0.46
Hoxc5P32043 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc5P32043 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc5P32043 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Paupar-201ENSMUST00000194826 3482 ntBASIC12.18□□□□□ -0.46
Hoxc5P32043 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.18□□□□□ -0.46
Hoxc5P32043 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc5P32043 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.17□□□□□ -0.46
Hoxc5P32043 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.17□□□□□ -0.46
Hoxc5P32043 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc5P32043 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc5P32043 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms