Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col2a1P28481 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Gm19994-201ENSMUST00000217086 586 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.69□□□□□ -0.06
Col2a1P28481 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Col2a1P28481 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.69□□□□□ -0.06
Col2a1P28481 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col2a1P28481 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Col2a1P28481 Gm12015-201ENSMUST00000117065 843 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Mir7070-201ENSMUST00000183657 86 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.69□□□□□ -0.06
Col2a1P28481 Gm5363-201ENSMUST00000211927 938 ntBASIC14.69□□□□□ -0.06
Col2a1P28481 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.69□□□□□ -0.06
Col2a1P28481 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col2a1P28481 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col2a1P28481 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col2a1P28481 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col2a1P28481 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col2a1P28481 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.68□□□□□ -0.06
Col2a1P28481 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col2a1P28481 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col2a1P28481 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.68□□□□□ -0.06
Col2a1P28481 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.68□□□□□ -0.06
Col2a1P28481 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.68□□□□□ -0.06
Col2a1P28481 Rmrp-201ENSMUST00000157463 271 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Mir3547-201ENSMUST00000175461 88 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col2a1P28481 Gm2260-201ENSMUST00000184965 657 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Gm19187-201ENSMUST00000206781 892 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.68□□□□□ -0.06
Col2a1P28481 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col2a1P28481 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.67□□□□□ -0.06
Col2a1P28481 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.67□□□□□ -0.06
Col2a1P28481 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Gm37466-201ENSMUST00000195692 652 ntBASIC14.67□□□□□ -0.06
Col2a1P28481 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.67□□□□□ -0.06
Col2a1P28481 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.67□□□□□ -0.06
Col2a1P28481 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col2a1P28481 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.67□□□□□ -0.06
Col2a1P28481 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col2a1P28481 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms