Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col8a2P25318 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.95□□□□□ -0.66
Col8a2P25318 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.95□□□□□ -0.66
Col8a2P25318 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.95□□□□□ -0.66
Col8a2P25318 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.95□□□□□ -0.66
Col8a2P25318 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col8a2P25318 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col8a2P25318 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Col8a2P25318 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col8a2P25318 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.94□□□□□ -0.66
Col8a2P25318 Snora78-201ENSMUST00000158630 128 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm17420-201ENSMUST00000164753 153 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm5370-201ENSMUST00000187187 574 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gm28693-202ENSMUST00000190758 331 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gm37008-201ENSMUST00000195712 319 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gm45930-201ENSMUST00000221330 292 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm10478-201ENSMUST00000084451 396 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col8a2P25318 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Col8a2P25318 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.94□□□□□ -0.66
Col8a2P25318 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.94□□□□□ -0.66
Col8a2P25318 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.94□□□□□ -0.66
Col8a2P25318 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col8a2P25318 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.93□□□□□ -0.66
Col8a2P25318 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col8a2P25318 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col8a2P25318 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Col8a2P25318 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms