Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.02□□□□□ -0.65
Tnfrsf1aP25118 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gm42612-201ENSMUST00000197986 623 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gm43170-201ENSMUST00000199827 612 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1aP25118 Gm5989-201ENSMUST00000096092 2077 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Ldb3-207ENSMUST00000227819 1499 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm22189-201ENSMUST00000103822 86 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm12416-201ENSMUST00000120911 1008 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Mir6977-201ENSMUST00000184960 64 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm44985-201ENSMUST00000206202 1016 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 AC192088.1-201ENSMUST00000227561 301 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tnfrsf1aP25118 Gm37861-201ENSMUST00000193534 2869 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms