Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
BdnfP21237 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.62□□□□□ -0.39
BdnfP21237 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.61□□□□□ -0.39
BdnfP21237 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
BdnfP21237 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
BdnfP21237 Gm12151-201ENSMUST00000121374 290 ntBASIC12.61□□□□□ -0.39
BdnfP21237 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.61□□□□□ -0.39
BdnfP21237 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
BdnfP21237 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.61□□□□□ -0.39
BdnfP21237 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.61□□□□□ -0.39
BdnfP21237 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.61□□□□□ -0.39
BdnfP21237 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
BdnfP21237 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
BdnfP21237 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.6□□□□□ -0.39
BdnfP21237 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
BdnfP21237 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.6□□□□□ -0.39
BdnfP21237 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.6□□□□□ -0.39
BdnfP21237 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.6□□□□□ -0.39
BdnfP21237 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.6□□□□□ -0.39
BdnfP21237 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.6□□□□□ -0.39
BdnfP21237 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
BdnfP21237 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms