Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgn1P18608 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgn1P18608 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12□□□□□ -0.49
Hmgn1P18608 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Hmgn1P18608 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12□□□□□ -0.49
Hmgn1P18608 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12□□□□□ -0.49
Hmgn1P18608 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 AC134335.2-201ENSMUST00000227660 440 ntBASIC12□□□□□ -0.49
Hmgn1P18608 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12□□□□□ -0.49
Hmgn1P18608 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Gm42829-201ENSMUST00000198417 2585 ntBASIC12□□□□□ -0.49
Hmgn1P18608 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12□□□□□ -0.49
Hmgn1P18608 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12□□□□□ -0.49
Hmgn1P18608 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgn1P18608 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.99□□□□□ -0.49
Hmgn1P18608 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.99□□□□□ -0.49
Hmgn1P18608 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.99□□□□□ -0.49
Hmgn1P18608 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.99□□□□□ -0.49
Hmgn1P18608 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms