Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdx1P18111 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx1P18111 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.63□□□□□ -0.71
Cdx1P18111 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm42466-201ENSMUST00000202099 1301 ntBASIC10.63□□□□□ -0.71
Cdx1P18111 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Cdx1P18111 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.63□□□□□ -0.71
Cdx1P18111 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdx1P18111 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdx1P18111 Gm28630-201ENSMUST00000187806 498 ntBASIC10.63□□□□□ -0.71
Cdx1P18111 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdx1P18111 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx1P18111 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cdx1P18111 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdx1P18111 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Gm13015-201ENSMUST00000118674 204 ntBASIC10.62□□□□□ -0.71
Cdx1P18111 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdx1P18111 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdx1P18111 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Gm29541-201ENSMUST00000191351 678 ntBASIC10.62□□□□□ -0.71
Cdx1P18111 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdx1P18111 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdx1P18111 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdx1P18111 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx1P18111 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.61□□□□□ -0.71
Cdx1P18111 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx1P18111 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdx1P18111 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx1P18111 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdx1P18111 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms