Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.6□□□□□ -0.39
Cntn1P12960 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cntn1P12960 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.6□□□□□ -0.39
Cntn1P12960 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cntn1P12960 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cntn1P12960 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cntn1P12960 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cntn1P12960 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cntn1P12960 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.59□□□□□ -0.39
Cntn1P12960 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Gm7029-201ENSMUST00000173226 450 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.59□□□□□ -0.39
Cntn1P12960 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 Gm10478-201ENSMUST00000084451 396 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cntn1P12960 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.59□□□□□ -0.39
Cntn1P12960 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn1P12960 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn1P12960 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn1P12960 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn1P12960 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn1P12960 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn1P12960 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.58□□□□□ -0.4
Cntn1P12960 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cntn1P12960 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cntn1P12960 Gm5187-201ENSMUST00000117317 991 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.58□□□□□ -0.4
Cntn1P12960 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cntn1P12960 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Gm27514-201ENSMUST00000183692 110 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Gm27572-201ENSMUST00000183702 255 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.58□□□□□ -0.4
Cntn1P12960 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn1P12960 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.58□□□□□ -0.4
Cntn1P12960 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn1P12960 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn1P12960 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms