Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.87□□□□□ -0.67
Cxcl1P12850 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cxcl1P12850 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Gm11594-201ENSMUST00000122313 162 ntBASIC10.86□□□□□ -0.67
Cxcl1P12850 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cxcl1P12850 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.86□□□□□ -0.67
Cxcl1P12850 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cxcl1P12850 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.86□□□□□ -0.67
Cxcl1P12850 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cxcl1P12850 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.85□□□□□ -0.67
Cxcl1P12850 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.85□□□□□ -0.67
Cxcl1P12850 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.85□□□□□ -0.67
Cxcl1P12850 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.85□□□□□ -0.67
Cxcl1P12850 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.85□□□□□ -0.67
Cxcl1P12850 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Gm8396-201ENSMUST00000057361 823 ntBASIC10.85□□□□□ -0.67
Cxcl1P12850 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.85□□□□□ -0.67
Cxcl1P12850 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cxcl1P12850 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cxcl1P12850 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms