Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Hoxc9P09633 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.9■□□□□ 0.3
Hoxc9P09633 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.9■□□□□ 0.3
Hoxc9P09633 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc9P09633 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hoxc9P09633 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc9P09633 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc9P09633 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc9P09633 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc9P09633 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc9P09633 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Mir874-201ENSMUST00000104769 76 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm7857-201ENSMUST00000117957 358 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm14921-201ENSMUST00000118643 908 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm25700-201ENSMUST00000177693 110 ntBASIC16.89■□□□□ 0.29
Hoxc9P09633 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.89■□□□□ 0.29
Hoxc9P09633 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc9P09633 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm12217-201ENSMUST00000118858 696 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm14277-201ENSMUST00000121195 360 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 B9d1os-201ENSMUST00000137010 674 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm8018-201ENSMUST00000173536 789 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm37201-201ENSMUST00000191845 523 ntBASIC16.88■□□□□ 0.29
Hoxc9P09633 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc9P09633 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc9P09633 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gm44262-201ENSMUST00000204969 372 ntBASIC16.87■□□□□ 0.29
Hoxc9P09633 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Nsd1-205ENSMUST00000224693 852 ntBASIC16.87■□□□□ 0.29
Hoxc9P09633 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms