Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Mir8109-201ENSMUST00000184375 117 ntBASIC19.46■□□□□ 0.71
NclP09405 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.46■□□□□ 0.71
NclP09405 Gm7172-201ENSMUST00000218047 1152 ntBASIC19.46■□□□□ 0.71
NclP09405 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC19.46■□□□□ 0.71
NclP09405 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NclP09405 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NclP09405 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NclP09405 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NclP09405 AC153366.2-201ENSMUST00000219461 1984 ntBASIC19.46■□□□□ 0.71
NclP09405 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NclP09405 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NclP09405 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NclP09405 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC19.46■□□□□ 0.71
NclP09405 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC19.45■□□□□ 0.7
NclP09405 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
NclP09405 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NclP09405 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Gm10327-201ENSMUST00000105222 1002 ntBASIC19.45■□□□□ 0.7
NclP09405 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC19.45■□□□□ 0.7
NclP09405 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NclP09405 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Gm37042-201ENSMUST00000193816 581 ntBASIC19.45■□□□□ 0.7
NclP09405 Gm3961-201ENSMUST00000204425 994 ntBASIC19.45■□□□□ 0.7
NclP09405 Gm18935-201ENSMUST00000212692 664 ntBASIC19.45■□□□□ 0.7
NclP09405 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Rassf8-202ENSMUST00000058538 1131 ntBASIC19.45■□□□□ 0.7
NclP09405 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NclP09405 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC19.45■□□□□ 0.7
NclP09405 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NclP09405 Gm8793-201ENSMUST00000183069 1303 ntBASIC19.45■□□□□ 0.7
NclP09405 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NclP09405 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NclP09405 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NclP09405 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC19.44■□□□□ 0.7
NclP09405 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Gm5896-201ENSMUST00000189662 1024 ntBASIC19.44■□□□□ 0.7
NclP09405 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.44■□□□□ 0.7
NclP09405 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC19.44■□□□□ 0.7
NclP09405 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NclP09405 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NclP09405 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC19.43■□□□□ 0.7
NclP09405 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NclP09405 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Gm7809-201ENSMUST00000153199 742 ntBASIC19.43■□□□□ 0.7
NclP09405 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC19.43■□□□□ 0.7
NclP09405 Olfr284-202ENSMUST00000206647 966 ntBASIC19.43■□□□□ 0.7
NclP09405 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC19.43■□□□□ 0.7
NclP09405 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NclP09405 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Gm11405-201ENSMUST00000118689 1556 ntBASIC19.43■□□□□ 0.7
NclP09405 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC19.43■□□□□ 0.7
NclP09405 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NclP09405 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC19.43■□□□□ 0.7
NclP09405 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NclP09405 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC19.42■□□□□ 0.7
NclP09405 Gm15897-201ENSMUST00000117770 1486 ntBASIC19.42■□□□□ 0.7
NclP09405 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NclP09405 Gm43822-201ENSMUST00000200285 476 ntBASIC19.42■□□□□ 0.7
NclP09405 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC19.42■□□□□ 0.7
NclP09405 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NclP09405 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms