Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.71□□□□□ -0.53
P06344 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
P06344 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.71□□□□□ -0.53
P06344 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Gm43438-201ENSMUST00000198133 379 ntBASIC11.71□□□□□ -0.53
P06344 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
P06344 Gm40466-201ENSMUST00000212174 422 ntBASIC11.71□□□□□ -0.53
P06344 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.71□□□□□ -0.53
P06344 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.71□□□□□ -0.53
P06344 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.71□□□□□ -0.53
P06344 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06344 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.71□□□□□ -0.54
P06344 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.71□□□□□ -0.54
P06344 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
P06344 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.71□□□□□ -0.54
P06344 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06344 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P06344 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.7□□□□□ -0.54
P06344 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Gm13369-201ENSMUST00000119442 987 ntBASIC11.7□□□□□ -0.54
P06344 Gm16177-201ENSMUST00000120728 718 ntBASIC11.7□□□□□ -0.54
P06344 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.7□□□□□ -0.54
P06344 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Snora78-201ENSMUST00000158630 128 ntBASIC11.7□□□□□ -0.54
P06344 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P06344 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.7□□□□□ -0.54
P06344 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.7□□□□□ -0.54
P06344 Gm43818-201ENSMUST00000200605 466 ntBASIC11.7□□□□□ -0.54
P06344 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.7□□□□□ -0.54
P06344 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.7□□□□□ -0.54
P06344 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.7□□□□□ -0.54
P06344 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.7□□□□□ -0.54
P06344 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.7□□□□□ -0.54
P06344 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P06344 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P06344 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.7□□□□□ -0.54
P06344 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
P06344 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.7□□□□□ -0.54
P06344 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P06344 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06344 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
P06344 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P06344 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
P06344 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.69□□□□□ -0.54
P06344 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
P06344 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06344 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms