Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.96□□□□□ -0.65
CfdP03953 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.96□□□□□ -0.65
CfdP03953 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.96□□□□□ -0.65
CfdP03953 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Gm44124-201ENSMUST00000204159 472 ntBASIC10.96□□□□□ -0.65
CfdP03953 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.96□□□□□ -0.65
CfdP03953 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.96□□□□□ -0.65
CfdP03953 Gm17330-201ENSMUST00000221047 165 ntBASIC10.96□□□□□ -0.65
CfdP03953 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
CfdP03953 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CfdP03953 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
CfdP03953 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
CfdP03953 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.96□□□□□ -0.66
CfdP03953 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CfdP03953 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CfdP03953 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.95□□□□□ -0.66
CfdP03953 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.95□□□□□ -0.66
CfdP03953 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CfdP03953 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
CfdP03953 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CfdP03953 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.94□□□□□ -0.66
CfdP03953 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Map1b-203ENSMUST00000223725 2669 ntBASIC10.94□□□□□ -0.66
CfdP03953 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.94□□□□□ -0.66
CfdP03953 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CfdP03953 Gm13365-201ENSMUST00000121188 973 ntBASIC10.94□□□□□ -0.66
CfdP03953 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.94□□□□□ -0.66
CfdP03953 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.94□□□□□ -0.66
CfdP03953 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.94□□□□□ -0.66
CfdP03953 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.94□□□□□ -0.66
CfdP03953 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CfdP03953 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.94□□□□□ -0.66
CfdP03953 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CfdP03953 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms