Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.57□□□□□ -0.88
TcraP01849 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.57□□□□□ -0.88
TcraP01849 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.57□□□□□ -0.88
TcraP01849 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.57□□□□□ -0.88
TcraP01849 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.57□□□□□ -0.88
TcraP01849 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rprl2-201ENSMUST00000157150 290 ntBASIC9.57□□□□□ -0.88
TcraP01849 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.57□□□□□ -0.88
TcraP01849 Gm6443-201ENSMUST00000203599 874 ntBASIC9.57□□□□□ -0.88
TcraP01849 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.57□□□□□ -0.88
TcraP01849 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TcraP01849 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
TcraP01849 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.57□□□□□ -0.88
TcraP01849 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TcraP01849 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
TcraP01849 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TcraP01849 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
TcraP01849 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.56□□□□□ -0.88
TcraP01849 Gm14494-201ENSMUST00000118786 435 ntBASIC9.56□□□□□ -0.88
TcraP01849 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.56□□□□□ -0.88
TcraP01849 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.56□□□□□ -0.88
TcraP01849 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.56□□□□□ -0.88
TcraP01849 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.56□□□□□ -0.88
TcraP01849 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.56□□□□□ -0.88
TcraP01849 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms