Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.37□□□□□ -0.75
P01788 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
P01788 Gm27772-201ENSMUST00000184900 187 ntBASIC10.37□□□□□ -0.75
P01788 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Gm2756-201ENSMUST00000195851 400 ntBASIC10.37□□□□□ -0.75
P01788 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.37□□□□□ -0.75
P01788 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
P01788 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.37□□□□□ -0.75
P01788 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Gm7775-201ENSMUST00000218871 853 ntBASIC10.37□□□□□ -0.75
P01788 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.37□□□□□ -0.75
P01788 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.37□□□□□ -0.75
P01788 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
P01788 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
P01788 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.37□□□□□ -0.75
P01788 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.37□□□□□ -0.75
P01788 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
P01788 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
P01788 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.37□□□□□ -0.75
P01788 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.36□□□□□ -0.75
P01788 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
P01788 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.36□□□□□ -0.75
P01788 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.36□□□□□ -0.75
P01788 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gm14701-201ENSMUST00000117156 348 ntBASIC10.36□□□□□ -0.75
P01788 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
P01788 Gm13223-201ENSMUST00000118609 747 ntBASIC10.36□□□□□ -0.75
P01788 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.36□□□□□ -0.75
P01788 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.36□□□□□ -0.75
P01788 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.36□□□□□ -0.75
P01788 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.36□□□□□ -0.75
P01788 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.36□□□□□ -0.75
P01788 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.36□□□□□ -0.75
P01788 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
P01788 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.36□□□□□ -0.75
P01788 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
P01788 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P01788 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.35□□□□□ -0.75
P01788 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P01788 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.35□□□□□ -0.75
P01788 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.35□□□□□ -0.75
P01788 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.35□□□□□ -0.75
P01788 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01788 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms