Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.55□□□□□ -0.24
CopeO89079 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.55□□□□□ -0.24
CopeO89079 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.55□□□□□ -0.24
CopeO89079 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
CopeO89079 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.55□□□□□ -0.24
CopeO89079 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopeO89079 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CopeO89079 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.54□□□□□ -0.24
CopeO89079 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.54□□□□□ -0.24
CopeO89079 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.54□□□□□ -0.24
CopeO89079 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CopeO89079 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Gm22175-201ENSMUST00000175007 78 ntBASIC13.54□□□□□ -0.24
CopeO89079 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.54□□□□□ -0.24
CopeO89079 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.54□□□□□ -0.24
CopeO89079 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CopeO89079 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CopeO89079 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.54□□□□□ -0.24
CopeO89079 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.54□□□□□ -0.24
CopeO89079 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopeO89079 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
CopeO89079 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.53□□□□□ -0.24
CopeO89079 Gm13453-201ENSMUST00000118708 357 ntBASIC13.53□□□□□ -0.24
CopeO89079 Gm12485-201ENSMUST00000119641 291 ntBASIC13.53□□□□□ -0.24
CopeO89079 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.53□□□□□ -0.24
CopeO89079 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.53□□□□□ -0.24
CopeO89079 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CopeO89079 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopeO89079 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms