Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ClppO88696 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ClppO88696 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.88□□□□□ -0.35
ClppO88696 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.87□□□□□ -0.35
ClppO88696 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.87□□□□□ -0.35
ClppO88696 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ClppO88696 Gm14660-201ENSMUST00000119809 575 ntBASIC12.87□□□□□ -0.35
ClppO88696 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ClppO88696 Gm6152-201ENSMUST00000151704 340 ntBASIC12.87□□□□□ -0.35
ClppO88696 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ClppO88696 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ClppO88696 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.87□□□□□ -0.35
ClppO88696 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.87□□□□□ -0.35
ClppO88696 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ClppO88696 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.86□□□□□ -0.35
ClppO88696 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
ClppO88696 Gm15770-201ENSMUST00000117498 584 ntBASIC12.86□□□□□ -0.35
ClppO88696 Gm12384-201ENSMUST00000119228 919 ntBASIC12.86□□□□□ -0.35
ClppO88696 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ClppO88696 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.86□□□□□ -0.35
ClppO88696 Gm24644-201ENSMUST00000157114 139 ntBASIC12.86□□□□□ -0.35
ClppO88696 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.86□□□□□ -0.35
ClppO88696 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.86□□□□□ -0.35
ClppO88696 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.86□□□□□ -0.35
ClppO88696 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.86□□□□□ -0.35
ClppO88696 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.86□□□□□ -0.35
ClppO88696 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.86□□□□□ -0.35
ClppO88696 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ClppO88696 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
ClppO88696 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.86□□□□□ -0.35
ClppO88696 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ClppO88696 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ClppO88696 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ClppO88696 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms