Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm11597-201ENSMUST00000121423 964 ntBASIC16.85■□□□□ 0.29
Nid2O88322 Gm19353-201ENSMUST00000184561 445 ntBASIC16.85■□□□□ 0.29
Nid2O88322 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.85■□□□□ 0.29
Nid2O88322 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.85■□□□□ 0.29
Nid2O88322 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nid2O88322 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid2O88322 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nid2O88322 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.84■□□□□ 0.29
Nid2O88322 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Nid2O88322 Gm8566-201ENSMUST00000120174 465 ntBASIC16.84■□□□□ 0.29
Nid2O88322 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.84■□□□□ 0.29
Nid2O88322 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nid2O88322 Gm5616-201ENSMUST00000165252 384 ntBASIC16.84■□□□□ 0.29
Nid2O88322 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.84■□□□□ 0.29
Nid2O88322 Gm8741-201ENSMUST00000174736 384 ntBASIC16.84■□□□□ 0.29
Nid2O88322 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.84■□□□□ 0.29
Nid2O88322 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.84■□□□□ 0.29
Nid2O88322 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.84■□□□□ 0.29
Nid2O88322 Gm44551-201ENSMUST00000208804 171 ntBASIC16.84■□□□□ 0.29
Nid2O88322 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.84■□□□□ 0.29
Nid2O88322 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.84■□□□□ 0.29
Nid2O88322 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid2O88322 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nid2O88322 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nid2O88322 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nid2O88322 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
Nid2O88322 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nid2O88322 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Nid2O88322 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nid2O88322 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nid2O88322 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.83■□□□□ 0.28
Nid2O88322 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.83■□□□□ 0.28
Nid2O88322 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Nid2O88322 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nid2O88322 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid2O88322 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.83■□□□□ 0.28
Nid2O88322 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.82■□□□□ 0.28
Nid2O88322 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nid2O88322 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nid2O88322 Gm11628-201ENSMUST00000117568 171 ntBASIC16.82■□□□□ 0.28
Nid2O88322 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nid2O88322 AY036118-201ENSMUST00000200021 923 ntBASIC16.82■□□□□ 0.28
Nid2O88322 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.82■□□□□ 0.28
Nid2O88322 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.82■□□□□ 0.28
Nid2O88322 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.82■□□□□ 0.28
Nid2O88322 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nid2O88322 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.81■□□□□ 0.28
Nid2O88322 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nid2O88322 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nid2O88322 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms