Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Snora73a-201ENSMUST00000082453 205 ntBASIC16.35■□□□□ 0.21
Cfdp1O88271 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cfdp1O88271 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cfdp1O88271 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cfdp1O88271 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cfdp1O88271 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.34■□□□□ 0.21
Cfdp1O88271 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Mir1938-201ENSMUST00000158746 100 ntBASIC16.34■□□□□ 0.21
Cfdp1O88271 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.34■□□□□ 0.21
Cfdp1O88271 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.34■□□□□ 0.21
Cfdp1O88271 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cfdp1O88271 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cfdp1O88271 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfdp1O88271 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfdp1O88271 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cfdp1O88271 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.33■□□□□ 0.2
Cfdp1O88271 Gm37008-201ENSMUST00000195712 319 ntBASIC16.33■□□□□ 0.2
Cfdp1O88271 Gm45880-201ENSMUST00000213041 853 ntBASIC16.33■□□□□ 0.2
Cfdp1O88271 Gm19163-201ENSMUST00000223313 780 ntBASIC16.33■□□□□ 0.2
Cfdp1O88271 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.33■□□□□ 0.2
Cfdp1O88271 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cfdp1O88271 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.33■□□□□ 0.2
Cfdp1O88271 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cfdp1O88271 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cfdp1O88271 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm12363-201ENSMUST00000122250 668 ntBASIC16.32■□□□□ 0.2
Cfdp1O88271 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm25261-201ENSMUST00000157416 134 ntBASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm25927-201ENSMUST00000175058 117 ntBASIC16.32■□□□□ 0.2
Cfdp1O88271 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.32■□□□□ 0.2
Cfdp1O88271 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.32■□□□□ 0.2
Cfdp1O88271 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfdp1O88271 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfdp1O88271 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.31■□□□□ 0.2
Cfdp1O88271 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfdp1O88271 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cfdp1O88271 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfdp1O88271 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms