Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Mir874-201ENSMUST00000104769 76 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gm15678-201ENSMUST00000117573 960 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Gm4875-201ENSMUST00000118257 786 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.07□□□□□ -0.48
Alx3O70137 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Alx3O70137 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.07□□□□□ -0.48
Alx3O70137 Gm19540-201ENSMUST00000221843 810 ntBASIC12.07□□□□□ -0.48
Alx3O70137 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Alx3O70137 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gm26226-201ENSMUST00000082509 116 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Gm24447-201ENSMUST00000083977 338 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.07□□□□□ -0.48
Alx3O70137 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Alx3O70137 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Alx3O70137 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx3O70137 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Alx3O70137 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Gm38294-201ENSMUST00000192831 381 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.06□□□□□ -0.48
Alx3O70137 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.06□□□□□ -0.48
Alx3O70137 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.06□□□□□ -0.48
Alx3O70137 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx3O70137 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Alx3O70137 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Alx3O70137 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms