Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Matn3O35701 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Matn3O35701 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.92□□□□□ -0.5
Matn3O35701 Gm13616-201ENSMUST00000120600 222 ntBASIC11.92□□□□□ -0.5
Matn3O35701 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
Matn3O35701 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.92□□□□□ -0.5
Matn3O35701 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Gm20553-201ENSMUST00000204205 844 ntBASIC11.92□□□□□ -0.5
Matn3O35701 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Gm45453-201ENSMUST00000211758 853 ntBASIC11.92□□□□□ -0.5
Matn3O35701 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Matn3O35701 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Matn3O35701 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Matn3O35701 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Matn3O35701 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Matn3O35701 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.92□□□□□ -0.5
Matn3O35701 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Matn3O35701 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.91□□□□□ -0.5
Matn3O35701 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.91□□□□□ -0.5
Matn3O35701 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Matn3O35701 Gm13365-201ENSMUST00000121188 973 ntBASIC11.91□□□□□ -0.5
Matn3O35701 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Matn3O35701 Gm27631-201ENSMUST00000184163 466 ntBASIC11.91□□□□□ -0.5
Matn3O35701 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.91□□□□□ -0.5
Matn3O35701 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Matn3O35701 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.91□□□□□ -0.5
Matn3O35701 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn3O35701 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Matn3O35701 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.9□□□□□ -0.5
Matn3O35701 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Matn3O35701 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.9□□□□□ -0.5
Matn3O35701 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.9□□□□□ -0.5
Matn3O35701 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn3O35701 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn3O35701 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.9□□□□□ -0.5
Matn3O35701 Rprl2-201ENSMUST00000157150 290 ntBASIC11.9□□□□□ -0.5
Matn3O35701 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms