Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npc1O35604 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Npc1O35604 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Npc1O35604 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npc1O35604 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npc1O35604 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.82□□□□□ -0.36
Npc1O35604 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.82□□□□□ -0.36
Npc1O35604 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Gm11803-201ENSMUST00000119966 444 ntBASIC12.82□□□□□ -0.36
Npc1O35604 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.82□□□□□ -0.36
Npc1O35604 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Proscos-202ENSMUST00000178990 666 ntBASIC12.82□□□□□ -0.36
Npc1O35604 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Gm45784-201ENSMUST00000188360 142 ntBASIC12.82□□□□□ -0.36
Npc1O35604 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.82□□□□□ -0.36
Npc1O35604 Gm8598-201ENSMUST00000221184 836 ntBASIC12.82□□□□□ -0.36
Npc1O35604 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npc1O35604 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.82□□□□□ -0.36
Npc1O35604 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Mir1982-201ENSMUST00000157368 74 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Gm22331-201ENSMUST00000158066 136 ntBASIC12.81□□□□□ -0.36
Npc1O35604 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Npc1O35604 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.81□□□□□ -0.36
Npc1O35604 AY702102-202ENSMUST00000194651 1173 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Npc1O35604 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.81□□□□□ -0.36
Npc1O35604 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npc1O35604 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.81□□□□□ -0.36
Npc1O35604 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms