Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 H2-Q3-201ENSMUST00000172583 608 ntBASIC19.79■□□□□ 0.76
Polr1aO35134 Gm9211-201ENSMUST00000182882 975 ntBASIC19.79■□□□□ 0.76
Polr1aO35134 Gm19353-201ENSMUST00000184561 445 ntBASIC19.79■□□□□ 0.76
Polr1aO35134 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Ntng1-201ENSMUST00000051253 327 ntBASIC19.79■□□□□ 0.76
Polr1aO35134 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC19.79■□□□□ 0.76
Polr1aO35134 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Polr1aO35134 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC19.79■□□□□ 0.76
Polr1aO35134 Gm44126-201ENSMUST00000204831 514 ntBASIC19.79■□□□□ 0.76
Polr1aO35134 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Polr1aO35134 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr1aO35134 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.78■□□□□ 0.76
Polr1aO35134 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Gm45242-201ENSMUST00000210666 2129 ntBASIC19.78■□□□□ 0.76
Polr1aO35134 AC137842.1-201ENSMUST00000227896 2064 ntBASIC19.78■□□□□ 0.76
Polr1aO35134 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Polr1aO35134 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Gm24934-201ENSMUST00000103764 111 ntBASIC19.78■□□□□ 0.76
Polr1aO35134 Gm15515-201ENSMUST00000117827 822 ntBASIC19.78■□□□□ 0.76
Polr1aO35134 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Polr1aO35134 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Polr1aO35134 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Polr1aO35134 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Polr1aO35134 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Gm11450-201ENSMUST00000121144 333 ntBASIC19.77■□□□□ 0.76
Polr1aO35134 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC19.77■□□□□ 0.76
Polr1aO35134 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC19.77■□□□□ 0.76
Polr1aO35134 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 AC154276.3-201ENSMUST00000227643 998 ntBASIC19.77■□□□□ 0.76
Polr1aO35134 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Polr1aO35134 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr1aO35134 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Polr1aO35134 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Polr1aO35134 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms